uchicago.src.sim.network
Class AdjacencyByteMatrix

java.lang.Object
  |
  +--uchicago.src.sim.network.AbstractAdjacencyMatrix
        |
        +--uchicago.src.sim.network.AdjacencyByteMatrix

All Implemented Interfaces:

AdjacencyMatrix

public class AdjacencyByteMatrix

extends AbstractAdjacencyMatrix

Field Summary

Fields inherited from class uchicago.src.sim.network.AbstractAdjacencyMatrix

comment, labels, matrixLabel

Constructor Summary

AdjacencyByteMatrix(byte[][] m)
Constructs an AdjacencyByteMatrix from the specified two dimensional byte array.

AdjacencyByteMatrix(ByteMatrix2D matrix)
Constructs an AdjancencyByteMatrix using the specified matrix.

AdjacencyByteMatrix(int rows, int cols)
Constructs an AdjacencyByteMatrix with the specified number of rows and columns.

AdjacencyByteMatrix(List labels)
Constructs an AdjacencyByteMatrix with the specified row/col labels.

Method Summary

int	columns() Returns the number of columns in the matrix.
double	get(int row, int col) Gets the value at row, col.
double	getAvgDegree() Gets the average degree of this matrix.
double	getDensity() Gets (computes) the density of this matrix.
cern.colt.matrix.impl.DenseDoubleMatrix1D	getRow(int row) Gets the specified row of data for this matrix.
String	matrixToString() Returns a String representation of only the actual data matrix.
int	rows() Returns the number of rows int matrix.
void	set(int row, int col, byte val) Sets a data value in this matrix.
void	set(int row, int col, double val) Sets a data value in this matrix.
void	setMatrix(byte[][] m) Sets the matrix for this AdjacencyByteMatrix to the specified byte[][].
void	setMatrix(cern.colt.matrix.impl.DenseDoubleMatrix2D m) Copies the matrix elements from the specified DenseDoubleMatrix2D and casts them into bytes.
String	toString() Returns a String representation of this AdjacencyMatrix (comment etc.) together with the actual data matrix.

Methods inherited from class uchicago.src.sim.network.AbstractAdjacencyMatrix

getComment, getLabels, getMatrixLabel, setComment, setMatrixLabel

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

AdjacencyByteMatrix

public AdjacencyByteMatrix(int rows,
                           int cols)

Constructs an AdjacencyByteMatrix with the specified number of rows and columns. The intial state of every ij is 0.

Parameters:

rows - the number of rows in the matrix

cols - the number of cols in the matrix

AdjacencyByteMatrix

public AdjacencyByteMatrix(List labels)

Constructs an AdjacencyByteMatrix with the specified row/col labels. The matrix row and column size are set equal to the size of the lables vector.

Parameters:

labels - the row & column labels

AdjacencyByteMatrix

public AdjacencyByteMatrix(byte[][] m)

Constructs an AdjacencyByteMatrix from the specified two dimensional byte array.

Parameters:

m - the 2D byte array to construct this AdjacencyMatrix from.

AdjacencyByteMatrix

public AdjacencyByteMatrix(ByteMatrix2D matrix)

Constructs an AdjancencyByteMatrix using the specified matrix. This holds a reference to the specified matrix and any changes to that will be reflected in this AdjacencyByteMatrix.

Parameters:

matrix - the matrix data for this AdjacencyMatrix

Method Detail

setMatrix

public void setMatrix(cern.colt.matrix.impl.DenseDoubleMatrix2D m)

Copies the matrix elements from the specified DenseDoubleMatrix2D and casts them into bytes. The matrix will be corrupted if any of the elements > 127.. For a large matrix this will be slow as the values are copied and cast individually.

Parameters:

m - the actual matrix data for this AdjacencyMatrix

setMatrix

public void setMatrix(byte[][] m)

Sets the matrix for this AdjacencyByteMatrix to the specified byte[][]. Note that this is not a copy and any subsequent changes to the specified byte[][] will be reflected in this AdjacencyByteMatrix.

Parameters:

m - the actual matrix data for this AdjacencyMatrix

getRow

public cern.colt.matrix.impl.DenseDoubleMatrix1D getRow(int row)

Gets the specified row of data for this matrix.

Parameters:

row - the index of the row to get

getDensity

public double getDensity()

Gets (computes) the density of this matrix.

getAvgDegree

public double getAvgDegree()

Gets the average degree of this matrix.

set

public void set(int row,
                int col,
                byte val)

Sets a data value in this matrix.

Parameters:

row - the row index (i)

col - the col index (j)

set

public void set(int row,
                int col,
                double val)

Sets a data value in this matrix.

Parameters:

row - the row index (i)

col - the col index (j)

get

public double get(int row,
                  int col)

Gets the value at row, col. This returns a double rather than a byte for implementation reasons. You can cast it back to a byte without loosing precision.

Parameters:

row - the row index (i)

col - the col index (j)

Returns:

the byte value at row, col (ij) as a double.

rows

public int rows()

Returns the number of rows int matrix.

columns

public int columns()

Returns the number of columns in the matrix.

matrixToString

public String matrixToString()

Returns a String representation of only the actual data matrix.

toString

public String toString()

Returns a String representation of this AdjacencyMatrix (comment etc.) together with the actual data matrix.

Overrides:

toString in class Object